The detailed information of tRNA gene sequence


Sequence ID>FG090100589
Genome IDCP000500
Search identical group
Phylum/ClassAscomycota
SpeciesPichia stipitis CBS 6054
Chromosome chr6
Start position on genome 1290439
End posion on genome 1290368
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcattatttacatgaacttttctccattttggcccaaatgaaaaatcgaaataaaatagtacacttatttaaacattagagcattttaagcaagaataa
tRNA gene sequence 
AGCGCAGTGGCGCAGTGGAAGCGCGCAGGGCTCATAACCCTGATGTCCCCGGATCGAAAC
CGGGCTGCGCTAgaa
Downstream region at tRNA end position 
ttcgcttttctttttgcacccgttttattctgcttgagtttcacattcactatccttttcttcgaccttatcctctttttgctacaagtaagaatatatt
Secondary structure (Cloverleaf model)
>FG090100589	Met	CAT
                   a      Agaa ttcgcttttctttttgcacccgttttattctgcttgagtttcacattcactatccttttcttcgaccttatcctctttttgctacaagtaagaatatatt
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          A A
                    T     G G G C C     A
        G A        G      | | | | |     G
      T     C G C G       C C C G G     C
      G     | | | |                 A T
      G     G C G C
        A A        G     ATGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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