The detailed information of tRNA gene sequence


Sequence ID>FG090100738
Genome IDCR382129
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrC
Start position on genome 383569
End posion on genome 383494
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taacttctgcttaaattagatctattttgtcaaaaatcggcgccgatcaagtgacgaaatctggatctcctaaaccaaaatttaccttttttcagaaaaT
tRNA gene sequence 
GCCTGGTTGGCTCAGTTGGTTAGAGCGTTAGTCTCATAATCTGAAGATCACCAGTTCGAC
CCTGGTACCGGGCATtt
Downstream region at tRNA end position 
ctctttttttctcgtaccgtttgatttattctttttttagtcccttccaaactactggcatgtcattggtatttgtccaaccaccccagaatcattttta
Secondary structure (Cloverleaf model)
>FG090100738	Met	CAT
                   T      ATtt ctctttttttctcgtaccgtttgatttattctttttttagtcccttccaaactactggcatgtcattggtatttgtccaaccaccccagaatcattttta
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C
                     T - A          C C
                    T     T G G T C     A
      T G A        G      | | | | |     G
    T       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGATC
                    T - A
                    T + G
                    A - T
                    G - C
                    T   T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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