The detailed information of tRNA gene sequence


Sequence ID>FG090200012
Genome IDCR382127
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrA
Start position on genome 376708
End posion on genome 376625
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gtggtagtgaatcatggcttttgaattttttttattccaataaaaaaaactttttttttcacactatggtggctactttttacaagatcagaaaatcagg
tRNA gene sequence 
GCCCGTTTAGCTTAGGGGTAGAGCGTTGCACTTGTAATGCAAAGGTCACTGGTTCGATTC
CAGTATCGGGCAgtt
Downstream region at tRNA end position 
gttttttgccaaattttggattgtacctccagaacgtacaagacagtatactgtacatagtggtgtcttcaatcggtaattgaattaatttggacggctt
Secondary structure (Cloverleaf model)
>FG090200012	Thr	TGT
                   g      Agtt gttttttgccaaattttggattgtacctccagaacgtacaagacagtatactgtacatagtggtgtcttcaatcggtaattgaattaatttggacggctt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T   T
                     T - A          T T
                    T     T G A C C     A
        G A        A      | | | | |     G
      G     T T C G       A C T G G     C
      G     + | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A *
                    T G T
intron: position=38, length=12 (in A-loop)
TTTCAGTTTGAG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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