The detailed information of tRNA gene sequence


Sequence ID>FG090300033
Genome IDCR382131
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrE
Start position on genome 3412285
End posion on genome 3412211
Amino Acid Ala
Anticodon AGC
Upstream region at tRNA start position 
tcttattcttgtccttgtcgtggtctcgtggtagtgaatcagggttagggttaagtgtctcacggtaccttggccatgttttttccaaacgcaacttcca
tRNA gene sequence 
GGGCGTCTGGTGTAGTTGGTTATCACATGCGCTTAGCATGCGCGAGGTCCCCGGTTCGAT
TCCGGTGTCGTCCACtt
Downstream region at tRNA end position 
ttttgtctccttatcaagagggagctcatttttgcactcacatttcttctcacatcactgctgcgtgtttaaacgaggttactgtaacattggagtgggg
Secondary structure (Cloverleaf model)
>FG090300033	Ala	AGC
                   a      ACtt ttttgtctccttatcaagagggagctcatttttgcactcacatttcttctcacatcactgctgcgtgtttaaacgaggttactgtaacattggagtgggg
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     T   T
                     C - G          T T
                    T     T G G C C     A
      T G A        G        | | | |     G
    T       T G T G       C C C G G     C
    G         | | |                 T T
    G       T C A C
      T T A        A     AGGTC
                    T + G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       T
                  T       A
                    A G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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