The detailed information of tRNA gene sequence


Sequence ID>FG090500012
Genome IDCR382127
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrA
Start position on genome 340343
End posion on genome 340263
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
agcacgaatagccgcggtgacggatcgagtatcactaacctccagtatcaggtttagccgcggccgattagccgccgaaccctaacagaccccaccattc
tRNA gene sequence 
GGGCGGTTGGTGTAGTGGTAACATATCTGCCTTCCAAGCAGGTGCCAGGGGTTCAATTCC
CCTACCGCTCAttc
Downstream region at tRNA end position 
ttttttgcttctcgtgtggatgtttttcttgtttgctgagtcaggattggtgtgtccggaagctgattgaaaaatgagaataatgacatactgactatag
Secondary structure (Cloverleaf model)
>FG090500012	Gly	TCC
                   c      Attc ttttttgcttctcgtgtggatgtttttcttgtttgctgagtcaggattggtgtgtccggaagctgattgaaaaatgagaataatgacatactgactatag
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T T
                    T     T C C C C     A
        G A        G      | | | | |     A
      T     T G T G       A G G G G     C
      G     | | | +                 T T
      G     A C A T
        T A        A     TGCC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C C
intron: position=38, length=10 (in A-loop)
AGAAGTTGCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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