The detailed information of tRNA gene sequence


Sequence ID>FG090500013
Genome IDCR382128
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrB
Start position on genome 501680
End posion on genome 501773
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ccgtaactgtctctagactctgcaaatgcgaaattttcgcggctgcaaaatgtcgtttgtcacaatatggagcccagattttcgtccttggaactgtcgg
tRNA gene sequence 
TCCCCTATAGCTCAGTTGGTAGAGCGTTCGGCTTTTAACCGAAATGTCCAGGGTTCGAGC
CCCTGTGGGGGAGCat
Downstream region at tRNA end position 
ttcctttttgcacccctgttggaaatacagtgcatgtgtggttgtatcacacacaacatttttcagcactgcgccaaccctagttacccggtcgtcaccc
Secondary structure (Cloverleaf model)
>FG090500013	Lys	TTT
                   g      GCat ttcctttttgcacccctgttggaaatacagtgcatgtgtggttgtatcacacacaacatttttcagcactgcgccaaccctagttacccggtcgtcaccc
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          C G
                    T     G T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    T T T
intron: position=38, length=20 (in A-loop)
GTTATACTAGGAGCATTGCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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