The detailed information of tRNA gene sequence


Sequence ID>FG090500019
Genome IDCR382130
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrD
Start position on genome 385087
End posion on genome 385171
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
cgaccaaagtgaccctttggaacttcttcaatgaccatttttttataaaaaaatgattcttacgaataaattatacagggtccgaatttagaaaaatcgt
tRNA gene sequence 
GGTTGTATAGTGTAGCGGTTATCACCTTGGATTCTGATTCCAGTAACCCCGGTTCGATTC
CGGGTACGACCTttt
Downstream region at tRNA end position 
tggattttttattctagaggaaatcagaaccaccagtaacatatttgtagaagctccatttatttttggatattctgttggattgatttggagtgattac
Secondary structure (Cloverleaf model)
>FG090500019	Gln	CTG
                   t      Tttt tggattttttattctagaggaaatcagaaccaccagtaacatatttgtagaagctccatttatttttggatattctgttggattgatttggagtgattac
                     G - C
                     G - C
                     T - A
                     T + G
                     G - C
                     T - A
                     A - T          T T
                    T     G G G C C     A
      C G A        A      | | | | |     G
    G       T G T G       C C C G G     C
    G         | | |                 T T
    T       T C A C
      T A          C     TAAC
                    T + G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A *
                    C T G
intron: position=38, length=13 (in A-loop)
AGAAAGCTTCGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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