The detailed information of tRNA gene sequence


Sequence ID>FG090500024
Genome IDCR382131
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrE
Start position on genome 2275827
End posion on genome 2275738
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tcttttgaatatctcaaaataacaattgaacacatttcccgggaaataagacatttttaaaaatatatagctccaacgctttttttactaacaagtccct
tRNA gene sequence 
GAGGACGTGGCGTAATGGTAGCGCATTGGATTTCGGCTCCAAAGGCTGCGGGTTCGAGTC
CTGTCGTCCTCTCtt
Downstream region at tRNA end position 
tttgtcagtgttttgttactaacttttcaatgaacaggaacgtggtcgcgttgatgcttgttacagcgcagtatcacgatttttttttctctccttcttt
Secondary structure (Cloverleaf model)
>FG090500024	Arg	TCG
                   t      TCtt tttgtcagtgttttgttactaacttttcaatgaacaggaacgtggtcgcgttgatgcttgttacagcgcagtatcacgatttttttttctctccttcttt
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T G T C C     A
        A A        G      + | + | |     G
      T     T G C G       G C G G G     C
      G     + | | |                 T T
      G     G C G C
        T A        A     AGGCT
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  T       C
                  T       G *
                    T C G
intron: position=38, length=17 (in A-loop)
TTCTTCTGAACGACGTC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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