The detailed information of tRNA gene sequence


Sequence ID>FG090800001
Genome IDAE016817
Search identical group
Phylum/ClassAscomycota
SpeciesAshbya gossypii ATCC 10895
Chromosome chr4
Start position on genome 9804
End posion on genome 9893
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gttttgggatactcgcggatacagctctgaccctgggcagccagttcacgtggccaacctgctcgtacgtatggcgcgccttttatacacactcatataa
tRNA gene sequence 
GAGAGTTTGGCCGAGTGGTTAAGGCGTCAGATTTAGGCTCTGATATCTACGGATGCGCGG
GTTCAAATCCCGTAGCTCTCAtta
Downstream region at tRNA end position 
tttattttttttaaatatcagtcataataaagcatagtgtatgttcttagttagcattggcatatagcgctggatcaatgtatccattatacccagcttt
Secondary structure (Cloverleaf model)
>FG090800001	Leu	TAG
                   a      Atta tttattttttttaaatatcagtcataataaagcatagtgtatgttcttagttagcattggcatatagcgctggatcaatgtatccattatacccagcttt
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     T G C C C     A
      T G A        G      + | | | |     A
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TATCTACGGATGC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G *
                    T A G
intron: position=38, length=9 (in A-loop)
TTGTAAACC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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