The detailed information of tRNA gene sequence


Sequence ID>FG090800009
Genome IDCR380952
Search identical group
Phylum/ClassAscomycota
SpeciesCandida glabrata CBS 138 CBS138
Chromosome chrF
Start position on genome 535673
End posion on genome 535530
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
tagaacagcaatattacctagaatttagttgatgtccttgacgtaaactatgattacaggggtataaaaccacctttggaggtctcaggtgtatgaaaat
tRNA gene sequence 
GCTCGTGTAGCTCAGTGGTTAGAGCTTCGTGCTTATAACGCGACCGTCGTGGGTTCAAAC
CCCACCTCGAGCActt
Downstream region at tRNA end position 
tctctcttttttttcttggccctcatgcaataaaattacccggagacagcttgtagagaaactttgttttgtgtcttttcatcgttctcagtgaatcatc
Secondary structure (Cloverleaf model)
>FG090800009	Ile	TAT
                   t      Actt tctctcttttttttcttggccctcatgcaataaaattacccggagacagcttgtagagaaactttgttttgtgtcttttcatcgttctcagtgaatcatc
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     T   T
                     G - C          C A
                    T     C A C C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     CCGTC
                    T - A
                    C - G
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A *
                    T A T
intron: position=38, length=71 (in A-loop)
GTGGCATCCCCCTTTGGGGAGCTAACTGTACTACTGTTTCTGGGTCTTAAATCTGGCTCAGGTCACAAGA
C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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