The detailed information of tRNA gene sequence


Sequence ID>FG090800014
Genome IDCR380957
Search identical group
Phylum/ClassAscomycota
SpeciesCandida glabrata CBS 138 CBS138
Chromosome chrK
Start position on genome 911660
End posion on genome 911560
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctattttatgcaagactttctgtgaggcattttttctttgatttttttcacgaagtataagggcaaatcgaataagattttctgttaatctctacaaaat
tRNA gene sequence 
GGCACTATGGCCGAGTGGTTAAGGCGAGAGACTCGAAATCTCTTGGGCTCTGCCCGCGCT
GGTTCAAATCCTGCTGGTGTCGttt
Downstream region at tRNA end position 
taatttttttgtcatgtttcctctgtagactgatattttcatataatttcattaggcatctaaggcgagcatgtattacagccaattcaatgctgaaata
Secondary structure (Cloverleaf model)
>FG090800014	Ser	CGA
                   t      Gttt taatttttttgtcatgtttcctctgtagactgatattttcatataatttcattaggcatctaaggcgagcatgtattacagccaattcaatgctgaaata
                     G - C
                     G + T
                     C - G
                     A - T
                     C - G
                     T + G
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | |   | |     A
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGCTCTGCCCGC
                    A - T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A *
                    C G A
intron: position=38, length=19 (in A-loop)
TTTTTCTGAACGTTCGGCT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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