The detailed information of tRNA gene sequence


Sequence ID>FG090800024
Genome IDAE017347
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr7
Start position on genome 1124405
End posion on genome 1124493
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccagaaaaaaaaactcgattcagtggcgaccaaaataacctataggcaacataaaaatttgcattccaatcgatgattcctcgtgaatcagcagtagtaa
tRNA gene sequence 
GCCCGTGTGGCCTAATGGTTAAGGCTTCTGACTTCTAATCAGAGGATTGTGGGTTCGAGT
CCCACCTTGGGCTtcc
Downstream region at tRNA end position 
ctttttgtcttttttttggtttcctaattttttgcatttcgttccagtgtatattagtgcatacaattgagcgtacgctcgatatctgtccctacatatt
Secondary structure (Cloverleaf model)
>FG090800024	Arg	TCT
                   a      Ttcc ctttttgtcttttttttggtttcctaattttttgcatttcgttccagtgtatattagtgcatacaattgagcgtacgctcgatatctgtccctacatatt
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     T   T
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       T C C G       G T G G G     C
    G       | | | |                 T T
    T       A G G C
      T A          T     GGATT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A *
                    T C T
intron: position=38, length=16 (in A-loop)
GGTTACGCAAGTGACT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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