The detailed information of tRNA gene sequence


Sequence ID>FG090800025
Genome IDAE017347
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr7
Start position on genome 1284832
End posion on genome 1284930
Amino Acid Pro
Anticodon AGG
Upstream region at tRNA start position 
taatccaattccggcattatgataaatgaaaaattcatttttcttctatataattttttgcattccgatccaacaacaattgggcttcggtggcatagcc
tRNA gene sequence 
GTTTCGTTGGTGCAGTGGTAGCATGCCCTCTTAGGGTGGGGGTGGTCCTCGGTTCAATCC
CGGGACGAGACCcaa
Downstream region at tRNA end position 
tatctttttttgttttgtttttttcagttaaaatccagactgctgctgcatcgcgtgtgccttgccgccagatcttgcatacggcgtaacgattgggatt
Secondary structure (Cloverleaf model)
>FG090800025	Pro	AGG
                   c      Ccaa tatctttttttgttttgtttttttcagttaaaatccagactgctgctgcatcgcgtgtgccttgccgccagatcttgcatacggcgtaacgattgggatt
                     G - C
                     T - A
                     T + G
                     T - A
                     C - G
                     G - C
                     T - A          C T
                    T     G G G C C     A
        G A        G      | + | | |     A
      T     C G T G       C T C G G     C
      G     | | | +                 T T
      G     G C A T
        T A        G     TGGTC
                    C - G
                    C - G
                    C - G
                    T + G
                    C - G
                  T       T
                  T       G *
                    A G G
intron: position=38, length=27 (in A-loop)
TTGGATTGCGTAAAAGCTTTCCGGCTT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK