The detailed information of tRNA gene sequence


Sequence ID>FG090800032
Genome IDAE017349
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr9
Start position on genome 946754
End posion on genome 946836
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaattataaatacaacaaggttttaaaactacaacaaaatattaccactgcccatttatactacttgtatatggtatcctttatatttagaattatga
tRNA gene sequence 
AACAGCGTAATTCAGAGGAAGAATGCAAGGCTCATAACCTTGAAGTCGCTGGATCGAAAC
CAGCCGCTGTTAtaa
Downstream region at tRNA end position 
tctttttgattattaaaatcttatttatatgtcgagctgcatagtttataattaggacggatcgcctctttttttttttcttagggctcgagtccttcag
Secondary structure (Cloverleaf model)
>FG090800032	Met	CAT
                   a      Ataa tctttttgattattaaaatcttatttatatgtcgagctgcatagtttataattaggacggatcgcctctttttttttttcttagggctcgagtccttcag
                     A - T
                     A - T
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          A A
                    T     C G A C C     A
        G A        A      | | | | |     G
      A     C T T A       G C T G G     C
      G     | | | |                 A T
      G     G A A T
        A A        G     AAGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A *
                    C A T
intron: position=38, length=11 (in A-loop)
TTTATTTGGGT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK