The detailed information of tRNA gene sequence


Sequence ID>FG090800070
Genome IDAL590448
Search identical group
Phylum/ClassMicrosporidia
SpeciesEncephalitozoon_cuniculi_GB-M1
Chromosome chr8
Start position on genome 107482
End posion on genome 107399
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aggtcttgtggttcaggcatacacgggctcaccccttgacattaaatattttataggagatgtgccaggcgatgaaaggcaggtgtgtgaggcatactag
tRNA gene sequence 
CTCTCAATAGCTCAGTGGTAGAGCATTCGACTGTAGATCGAATGGCCGCTGGTTCGACTC
CAGCTTGGGAGAttc
Downstream region at tRNA end position 
ttttttgcttgctgcacctccctgcaacaaaagaatgcgacctcccaggctcgaactggggaccttccgcgtgttaggcgaacgtgataaccactacact
Secondary structure (Cloverleaf model)
>FG090800070	Tyr	GTA
                   g      Attc ttttttgcttgctgcacctccctgcaacaaaagaatgcgacctcccaggctcgaactggggaccttccgcgtgttaggcgaacgtgataaccactacact
                     C - G
                     T - A
                     C - G
                     T + G
                     C - G
                     A - T
                     A - T          T C
                    T     C G A C C     A
        G A        A      | | | | |     G
      T     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGCC
                    T - A
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G *
                    G T A
intron: position=38, length=12 (in A-loop)
AGGTGTGCTGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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