The detailed information of tRNA gene sequence


Sequence ID>FG090800100
Genome IDCU329672
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr3
Start position on genome 2072080
End posion on genome 2072174
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaaagtgcttttgctctgttgttcatggcaattaaatataatttcctttcatttaatatccacattatatattatttaactcggtctcaatgccaagaa
tRNA gene sequence 
GACAACGTGGCCGAGTGGTTTTAAGGCGTTCGCCTGCTAAGCGGATTCCCTTTGGGAGCG
CAGGTTCGAATCCTGCCGTTGTCGaca
Downstream region at tRNA end position 
tatacttattatttatttttcgcaaatgagcctttaccagccatttacatttttttatatctatcagtagctaaaacaattcctcccgaatagtcagtca
Secondary structure (Cloverleaf model)
>FG090800100	Ser	GCT
                   a      Gaca tatacttattatttatttttcgcaaatgagcctttaccagccatttacatttttttatatctatcagtagctaaaacaattcctcccgaatagtcagtca
                     G - C
                     A - T
                     C - G
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C G T C C     A
    G T G A        G      | | | | |     G
  G         G C C G       G C A G G     C
  T           | | |                 T T
  T         A G G C
    T T A          G     TTCCCTTTGGGAGC
                    T - A
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A *
                    G C T
intron: position=38, length=11 (in A-loop)
TTCTGTAGCCC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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