The detailed information of tRNA gene sequence


Sequence ID>FG090800113
Genome IDCR382128
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrB
Start position on genome 383135
End posion on genome 383220
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
atcgcacactaggatgtcattatatgccatcaaaaaatttaggtcacgtgacttgtctgttgcagtgtagagggtttcttttcccgaaaccttacagcca
tRNA gene sequence 
GCCTGTTTGGCCAAGTGGCTAAGGCGTCTCACTCGTAATGAGAAGAGCACCAGTTCGACT
CTGGTAATAGGCAaaa
Downstream region at tRNA end position 
attttttgggtattggacgacactatagaatgcgttcagattcaattttttgagatcaattcgtcaaaaaaatacgaaattaatttaattgagccacagt
Secondary structure (Cloverleaf model)
>FG090800113	Thr	CGT
                   a      Aaaa attttttgggtattggacgacactatagaatgcgttcagattcaattttttgagatcaattcgtcaaaaaaatacgaaattaatttaattgagccacagt
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T
                     T - A
                     T - A          T C
                    T     T G G T C     A
      T G A        G      | | | | |     G
    G       A C C G       A C C A G     C
    G         | | |                 T T
    C       A G G C
      T A          G     AGAGC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A *
                    C G T
intron: position=38, length=13 (in A-loop)
TCACAAATGCGAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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