The detailed information of tRNA gene sequence


Sequence ID>FG090800122
Genome IDCR382128
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrB
Start position on genome 487454
End posion on genome 487372
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
attctatttaatattctattttagattctatttttagttctggtcacgtgatcaaaattttcgagtgtgatgggaacgatttctaaaatttcaacaaaat
tRNA gene sequence 
GCCTGGCTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGCTGTGGGTTCAAGC
CCCACGTCGGGCTctc
Downstream region at tRNA end position 
ttttttgggtggtatttgcgtgtacaagtacaagtagtaggctaccaccgtgagttgcgtctaatttttttttcgcgcggccgaactttaaatggatcac
Secondary structure (Cloverleaf model)
>FG090800122	Lys	CTT
                   t      Tctc ttttttgggtggtatttgcgtgtacaagtacaagtagtaggctaccaccgtgagttgcgtctaatttttttttcgcgcggccgaactttaaatggatcac
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C
                     G + T
                     C - G          C G
                    T     C A C C C     A
      T A A        A      | | | | |     A
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    T - A
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A *
                    C T T
intron: position=38, length=10 (in A-loop)
TTCCAAGGTC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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