The detailed information of tRNA gene sequence


Sequence ID>FG090800124
Genome IDCR382128
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrB
Start position on genome 288773
End posion on genome 288682
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ttttagttgtttctaattttttttgatttttttattcgagattcatgtgactttttcagcctaacaaaaagtcccaatgaaagtttttagtcacgttcaa
tRNA gene sequence 
GACTTCGTGGCCAAGTTGGTTAAGGCGTACGACTGTTAATCGTAAGATCGAGAGTTCGAC
CCTCTCCGAGGTCGtct
Downstream region at tRNA end position 
tgaacttttgcacttcgagatactattgtttttgcatctctactgttatgcatgcttttttgcggtgctctgtcttcagatcgacagcagttttttttca
Secondary structure (Cloverleaf model)
>FG090800124	Asn	GTT
                   a      Gtct tgaacttttgcacttcgagatactattgtttttgcatctctactgttatgcatgcttttttgcggtgctctgtcttcagatcgacagcagttttttttca
                     G - C
                     A - T
                     C - G
                     T + G
                     T - A
                     C - G
                     G - C          C C
                    T     C T C T C     A
      T G A        G      | | | | |     G
    T       A C C G       G A G A G     C
    G         | | |                 T T
    G       A G G C
      T T A        G     AGATC
                    T - A
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A *
                    G T T
intron: position=38, length=18 (in A-loop)
GTCACCTAAATGGCCGCC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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