The detailed information of tRNA gene sequence


Sequence ID>FG090800135
Genome IDCR382129
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrC
Start position on genome 2706742
End posion on genome 2706656
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ttccctctttgttgcttcgacatttccccgtgtcgaattttccgatgacgtaattaccaaccacatggtcgtggccacattttcccattttggaaccgac
tRNA gene sequence 
GGTTGTGTAGTGTAGTGGTCATCACGTCAGATTTTGATTCTGAGAACCCCAGTTCGAACC
CGGGCACGACCTtat
Downstream region at tRNA end position 
ttttttgaccccaatttctcctaagtcgtatgactatataaacaccttgccacatgtcgtactgataggtacaatgcctttacccctagacatttggaca
Secondary structure (Cloverleaf model)
>FG090800135	Gln	TTG
                   c      Ttat ttttttgaccccaatttctcctaagtcgtatgactatataaacaccttgccacatgtcgtactgataggtacaatgcctttacccctagacatttggaca
                     G - C
                     G - C
                     T - A
                     T + G
                     G - C
                     T - A
                     G - C          C A
                    T     G G G C C     A
      T G A        A      | | |   |     G
    G       T G T G       C C C A G     C
    G         | | |                 T T
    T       T C A C
      C A          G     GAAC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A *
                    T T G
intron: position=38, length=15 (in A-loop)
TTGGTCCGATTAACT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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