The detailed information of tRNA gene sequence


Sequence ID>FG090800140
Genome IDCR382129
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrC
Start position on genome 643111
End posion on genome 643019
Amino Acid Ile
Anticodon AAT
Upstream region at tRNA start position 
ttaaaattctatgatttattgggaaatgacttaaacctaggaatatattgatccaacgatttttttggttaatgttcacttggtcccttaatgttcactt
tRNA gene sequence 
GGTCCCTTGGCCCAGTTGGTTAAGGCGTCGTGCTAATAACGCGAAGATCAGCAGTTCGAT
CCTGCTAGGGACCAaat
Downstream region at tRNA end position 
tttttccaatttagctgggatgtatatttttttgttacattttcatcatgatattctttcatcagtcttgaatcactcttccatgtatatcacgtgatct
Secondary structure (Cloverleaf model)
>FG090800140	Ile	AAT
                   t      Aaat tttttccaatttagctgggatgtatatttttttgttacattttcatcatgatattctttcatcagtcttgaatcactcttccatgtatatcacgtgatct
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          C T
                    T     T C G T C     A
      T G A        G      | | | | |     G
    T       C C C G       A G C A G     C
    G         | | |                 T T
    G       A G G C
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A *
                    A A T
intron: position=38, length=19 (in A-loop)
AGAAATTAGCCTCTTTGCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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