The detailed information of tRNA gene sequence


Sequence ID>FG090800143
Genome IDCR382129
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrC
Start position on genome 323200
End posion on genome 323120
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ccattttaacagagtatgacgcgtttttcaggaagtttttgcagtttcactactcaatctctcccggaagtaccccctattctcaccggtcttccaccag
tRNA gene sequence 
GGTCTAGTGGTGTAATGGTTATCACGTCTCGCTCACACCGAGGAGGCTCGGAGTTCGATC
CTCCGCTGGATCAtgt
Downstream region at tRNA end position 
gacttggaaacaagttgtattttttgttggttcaagtcggagagccccggggaaaatcgacggagtattgttagaagttacttggtaattacttgatctc
Secondary structure (Cloverleaf model)
>FG090800143	Val	CAC
                   g      Atgt gacttggaaacaagttgtattttttgttggttcaagtcggagagccccggggaaaatcgacggagtattgttagaagttacttggtaattacttgatctc
                     G - C
                     G + T
                     T - A
                     C - G
                     T + G
                     A - T
                     G - C          C T
                    T     G C C T C     A
      T A A        G      | | | | |     G
    G       T G T G       C G G A G     C
    G         | | |                 T T
    T       T C A C
      T A          G     AGGCT
                    T + G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A *
                    C A C
intron: position=38, length=8 (in A-loop)
TTTCAGTG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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