The detailed information of tRNA gene sequence


Sequence ID>FG090800145
Genome IDCR382130
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrD
Start position on genome 1743228
End posion on genome 1743315
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aatcggccaaggtctcaaatcgcccaaaacgacgcattttctcgaatatctgcgtttttcagaatcgctgctccactttccacggtttgaaaacaaacgg
tRNA gene sequence 
GCCGTCATAGTATAGTGGTTAGTACATCACGTTGTGGCCGTGAAAACCTCAGTTCGATTC
TGGGTGACGGCAacc
Downstream region at tRNA end position 
agctccgcaaggagtattattttgttttctgattctggcgctgctactacaagtagtacacatgctggtttccatacaccctgtgatgctataactttca
Secondary structure (Cloverleaf model)
>FG090800145	His	GTG
                   g      Aacc agctccgcaaggagtattattttgttttctgattctggcgctgctactacaagtagtacacatgctggtttccatacaccctgtgatgctataactttca
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     C - G
                     A - T          T T
                    T     G G G T C     A
      T G A        A      | + | | |     G
    G       T A T G       C T C A G     C
    G       + | | |                 T T
    T       G T A C
      T A          A     AAAC
                    T - A
                    C - G
                    A - T
                    C - G
                    G - C
                  T       C
                  T       G *
                    G T G
intron: position=38, length=16 (in A-loop)
TTCTTTCAGTAGTGTC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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