The detailed information of tRNA gene sequence


Sequence ID>FG090800147
Genome IDCR382130
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrD
Start position on genome 1817428
End posion on genome 1817519
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccgcgcatccgcctcagaggaatgagcgacgaagttgttttgttgtttttttccgcgttttttcggatcaaaaccatgcaacgcagttgaaatgaaacaa
tRNA gene sequence 
GGCAACTTGCCGGAGTGGTTAACGGGACAGATTCGAAATCTGTTGGGCTTTGCCCGCGCA
GGTTCGAATCCTGCAGTTGTCGagc
Downstream region at tRNA end position 
tgttggataacagacgattctttttttatggatcaagacaaaccggcatcatttcttttcgtgtcaattggttgggctcatgacagtcagattcgccatt
Secondary structure (Cloverleaf model)
>FG090800147	Ser	CGA
                   a      Gagc tgttggataacagacgattctttttttatggatcaagacaaaccggcatcatttcttttcgtgtcaattggttgggctcatgacagtcagattcgccatt
                     G - C
                     G + T
                     C - G
                     A - T
                     A - T
                     C - G
                     T - A          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G G C C       G C A G G     C
    G         | | |                 T T
    T       A C G G
      T A          G     TGGGCTTTGCCCGC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A *
                    C G A
intron: position=38, length=10 (in A-loop)
CCATCGTACT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK