The detailed information of tRNA gene sequence


Sequence ID>FG090800156
Genome IDCR382130
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrD
Start position on genome 1028206
End posion on genome 1028112
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agccgggttattggcgttcaataaatcacacacttctgaatataaaaaatccccatttttaactttgaatacgacaatacgggctctgatcttcaccccc
tRNA gene sequence 
GGTCTAGTGGTGTAATGGTTATCACGTCTCGCTCACACCGAGGAGGCTCAGAGTTCGATC
CTCTGCTGGATCAtct
Downstream region at tRNA end position 
tttttgcttgaggcacggagtctgctgcaagtctccattatttgttcctcaacttcacctccttctgctacacaccagaagctgaacgcttatacacagg
Secondary structure (Cloverleaf model)
>FG090800156	Val	CAC
                   c      Atct tttttgcttgaggcacggagtctgctgcaagtctccattatttgttcctcaacttcacctccttctgctacacaccagaagctgaacgcttatacacagg
                     G - C
                     G + T
                     T - A
                     C - G
                     T + G
                     A - T
                     G - C          C T
                    T     G T C T C     A
      T A A        G      | | | | |     G
    G       T G T G       C A G A G     C
    G         | | |                 T T
    T       T C A C
      T A          G     AGGCT
                    T + G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A *
                    C A C
intron: position=38, length=22 (in A-loop)
AAGTGGCTTCAATCTACGAGTG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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