The detailed information of tRNA gene sequence


Sequence ID>FG092210001
Genome IDCU329670
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr1
Start position on genome 1527182
End posion on genome 1527087
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aatagtaacgaattcagatatattaaataaaggcacacataatctctaaagattacagtttaatggctctttcaaagtgtttagtaatatatacactaaatttctaaaattcagtagtta
tRNA gene sequence 
GGCGAAGTGGCCGAGTGGTCTATGGCGCTAGCTTCAGGTGCTAGTCTACGTATGTGGGCG
TGGGTTCGAACCCCACCTTCGTCAAta
Downstream region at tRNA end position 
tataattttttatatcatgttaatggaattgagaaaaagcaagctgtcagtttatactttcaatgttatgcagaaaccgttttatttcaattatttacactgtttgacactactaaagca
Secondary structure (Cloverleaf model)
>FG092210001	Leu	CAG
                   a      AAta tataattttttatatcatgttaatggaattgagaaaaagcaagctgtcagtttatactttcaatgttatgcagaaaccgttttatttcaattatttacactgtttgacactactaaagca
                     G - C
                     G + T
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          C A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    T       T G G C
      C T A        G     TCTACGTATGTGGGC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T *
                  T       G
                    C A G
intron: position=39, length=10 (in A-loop)
TGAAAGCAAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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