The detailed information of tRNA gene sequence


Sequence ID>FG092510001
Genome IDCU329670
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr1
Start position on genome 1746464
End posion on genome 1746547
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ataaacttgtacggatctaattatcatcattatttgaatctactccggctaatttaagatacaagatatttaatttttcatatattatatatattctattagacaccacttctcaactaa
tRNA gene sequence 
CTCCTGATGGTGTAGTTGGTTATCACACCCGGCTGTAAACCGGTTGGTCGCTAGTTCGAT
TCTGGCTCAGGAGAtct
Downstream region at tRNA end position 
tcttttttgcttccacctggtaaactttaaaatataaataaatatatgttcagatctgataaaccttattgttgcaatcaatatctcattataaaacgataggatgttatcacttcaata
Secondary structure (Cloverleaf model)
>FG092510001	Tyr	GTA
                   a      Atct tcttttttgcttccacctggtaaactttaaaatataaataaatatatgttcagatctgataaaccttattgttgcaatcaatatctcattataaaacgataggatgttatcacttcaata
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C
                     A - T          T T
                    T     C G G T C     A
      T G A        G      | | + | |     G
    T       T G T G       G C T A G     C
    G         | | |                 T T
    G       T C A C
      T T A        A     TGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    G T A
intron: position=38, length=10 (in A-loop)
TTTCGATGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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