The detailed information of tRNA gene sequence


Sequence ID>FG092810003
Genome IDCU329670
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr1
Start position on genome 3710822
End posion on genome 3710738
Amino Acid Val
Anticodon AAC
Upstream region at tRNA start position 
atatgctagccaagaacttcaaattcctaggtagatattaaataacaaataatcatttttatcaatatatatatttaagaatccgtttagatatattttatgtgttgaatgaataatcca
tRNA gene sequence 
GGTCGTGTGGTTTAGATGGTTATAATTTCTGCTTAACACGCAGACGGTCCCAAGTTCGAG
TCTTGGCACGATCAAat
Downstream region at tRNA end position 
atatttttgtaagaaaaccaaaattgtcttaaacatgtgctttgtttgtctgttggttaatcgaaaaaattaaacagccgccgctagtatgattaactatgaggatttttgctgaagtat
Secondary structure (Cloverleaf model)
>FG092810003	Val	AAC
                   a      AAat atatttttgtaagaaaaccaaaattgtcttaaacatgtgctttgtttgtctgttggttaatcgaaaaaattaaacagccgccgctagtatgattaactatgaggatttttgctgaagtat
                     G - C
                     G + T
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C          T G
                    T     G G T T C     A
      A G A        G      | | | | |     G
    T       T T T G       C C A A G     C
    G         | | +                 T T
    G       T A A T
      T T A        T     CGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C *
                  T       A
                    A A C
intron: position=39, length=9 (in A-loop)
TTTACAGTT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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