The detailed information of tRNA gene sequence


Sequence ID>FG092910002
Genome IDCU329670
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr1
Start position on genome 1315020
End posion on genome 1314924
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atgaaaagaaaagcgtcattattggtattttagttttcagagcaaagaggtacttaacatttattatgtcgcaattattttatatatatattatattaatattttgtaatgagaaaccta
tRNA gene sequence 
GGCCTAATAGTGTAGTGGTTAACATACCTCTTTCGGGTAGAGGTGATCCCTGGTTCGAAT
CCTGGTTAGGCCCctt
Downstream region at tRNA end position 
ctttttatactgggcttgctgtataaatttatctgattaattttgaaactacgcaaaccaactttcaataattaaaaagttttccttacaccttgcttgattaccttttaatagatgtga
Secondary structure (Cloverleaf model)
>FG092910002	Pro	CGG
                   a      Cctt ctttttatactgggcttgctgtataaatttatctgattaattttgaaactacgcaaaccaactttcaataattaaaaagttttccttacaccttgcttgattaccttttaatagatgtga
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T
                     A - T          T A
                    T     G G T C C     A
      T G A        A      | |   | |     G
    G       T G T G       C C T G G     C
    G       | | | +                 T T
    T       A C A T
      T A          A     TGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    T - A
                  T       T
                  T       G *
                    C G G
intron: position=38, length=24 (in A-loop)
TAATCCCCACTTGTATGCTGAGTT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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