The detailed information of tRNA gene sequence


Sequence ID>FG092910005
Genome IDCU329670
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr1
Start position on genome 1704582
End posion on genome 1704664
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gaaaacaattccaccttttaaatttcgtaggcaatcatcgtcaaacaacaaaatatatattcttatgaggattctttttgcactacatattacactgaataacttaagtcgtcaacgaag
tRNA gene sequence 
TCCCGAGTGGCTCAATCGGTTTAGAGCGTCTGACTCTTAATCAGAAGGTTGCGAGTTCGA
GTCTCGCCTTGGGAGttt
Downstream region at tRNA end position 
tttattttttcaatttttttacaatgatactacaatttttggaatgtaaagattacttaaatacaaaatggtacgtttaaagaaatacgtacttagggaaattatgataaattcaactta
Secondary structure (Cloverleaf model)
>FG092910005	Lys	CTT
                   g      Gttt tttattttttcaatttttttacaatgatactacaatttttggaatgtaaagattacttaaatacaaaatggtacgtttaaagaaatacgtacttagggaaattatgataaattcaactta
                     T - A
                     C - G
                     C - G
                     C - G
                     G + T
                     A - T
                     G - C          T G
                    T     C G C T C     A
    C T A A        G      | | | | |     G
  G         C T C G       G C G A G     C
  G         | | | |                 T T
  T         G A G C
    T T A          G     AGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A *
                    C T T
intron: position=38, length=8 (in A-loop)
TGATGGTA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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