The detailed information of tRNA gene sequence


Sequence ID>FG092910015
Genome IDCU329670
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr1
Start position on genome 2802858
End posion on genome 2802761
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
actaatttatacgattttagtcaggttgtgtacatatactctaataaacccagacaatttacagtacacgcaactatttttatagatatatacctctatttaattagtttgtacaattaa
tRNA gene sequence 
GCGGCTATGCCCGAGTGGTCTAAGGGGGCAGATTTAAGCCCTGCTGTTGTAAAACGCGAG
AGTTCGAACCTCTCTGGCCGCAtta
Downstream region at tRNA end position 
ttatattttacatttttaaatgtaaaattaacgtgtttttgatttacagttgaactaaatttttttcaaatttgttgaacattttgcttttgtttattctttttttttcttctttttcat
Secondary structure (Cloverleaf model)
>FG092910015	Leu	TAA
                   a      Atta ttatattttacatttttaaatgtaaaattaacgtgtttttgatttacagttgaactaaatttttttcaaatttgttgaacattttgcttttgtttattctttttttttcttctttttcat
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T          C A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C C       G A G A G     C
    G         | | |                 T T
    T       A G G G
      C T A        G     TGTTGTAAAACGC
                    G - C
                    C - G
                    A - T
                    G - C
                    A   C
                  T       C
                  T       G *
                    T A A
intron: position=38, length=16 (in A-loop)
AGGCTTCTGCCTTGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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