The detailed information of tRNA gene sequence


Sequence ID>FG092910020
Genome IDCU329670
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr1
Start position on genome 3591948
End posion on genome 3592044
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ataaccgaagttgtatttaatcattacaacatatccattcttttattaccttttatttttattttgagctctattaatccttgctatattatgtacataatcgttagtatgttacagaaa
tRNA gene sequence 
GGATGGGTGTCCGAGTGGTTATGGAGCTGGCTTTAGGCGCCAGTGCGAAAGCTCGCGGGT
TCGAGTCCCGTCCCATTCAata
Downstream region at tRNA end position 
atatttattttttatattattattttaaatcggtatatgagtttatttcttcaagcttgatggaggaaaaaaaaccctgttaatggctgctgtttatctttaaaaagttctttaaacaaa
Secondary structure (Cloverleaf model)
>FG092910020	Leu	TAG
                   a      Aata atatttattttttatattattattttaaatcggtatatgagtttatttcttcaagcttgatggaggaaaaaaaaccctgttaatggctgctgtttatctttaaaaagttctttaaacaaa
                     G - C
                     G + T
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       G C C T       G C G G G     C
    G       + | | |                 T T
    T       T G G A
      T A          G     TGCGAAAGCTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  T       C
                  T       G *
                    T A G
intron: position=38, length=18 (in A-loop)
TGCGTTCAACGCATTGCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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