The detailed information of tRNA gene sequence


Sequence ID>FU090900012
Genome IDAE016818
Search identical group
Phylum/ClassAscomycota
SpeciesAshbya gossypii ATCC 10895
Chromosome chr5
Start position on genome 102562
End posion on genome 102468
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
tcgaccttcaccagcaccaactgaaaagctctcaatttggcacgcttaatagctctatgcgatgtgttatagcagcaatatttctgaattaccacgattc
tRNA gene sequence 
GGTTGTGTAGTGTAGAGGTTATCACTGTGGATTCTGATTCCACTAACCTCGGTTCGAATC
CGAGCACGACCAatt
Downstream region at tRNA end position 
tttgtactgaactccgataatttgttttgttattttcccgtttcgtctaagtgaagttatatatttaaagccaaaaaattggtcgtgctcggattcgaac
Secondary structure (Cloverleaf model)
>FU090900012	Gln	CTG
                   c      Aatt tttgtactgaactccgataatttgttttgttattttcccgtttcgtctaagtgaagttatatatttaaagccaaaaaattggtcgtgctcggattcgaac
                     G - C
                     G - C
                     T - A
                     T + G
                     G - C
                     T - A
                     G - C          T A
                    T     G A G C C     A
      A G A        A      | | | | |     G
    G       T G T G       C T C G G     C
    G         | | |                 T T
    T       T C A C
      T A          T     TAAC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A *
                    C T G
intron: position=38, length=23 (in A-loop)
TATGGCTGTTAAAAGCTTGAACA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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