The detailed information of tRNA gene sequence


Sequence ID>FU090900040
Genome IDCR380955
Search identical group
Phylum/ClassAscomycota
SpeciesCandida glabrata CBS 138 CBS138
Chromosome chrI
Start position on genome 236933
End posion on genome 237020
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tgagaaaggacttatatgattacccttctgcagtcatcgcggcaaaggtattataagacaaggtcaagcggtcaagttctacatccaacgaatttaatta
tRNA gene sequence 
CTCTCGGTAGCCAAGTTGGTTTAAGGCGCAAGACTGTAAATCTTGAGATCGGGCGTTCGA
ATCGCCCCCGGGAGAtat
Downstream region at tRNA end position 
tttttcagcttcttttattttttttaatttttaaggctatttccatctggaaattatatattttgactagaacaatgggagctggcacccatttatgaga
Secondary structure (Cloverleaf model)
>FU090900040	Tyr	GTA
                   a      Atat tttttcagcttcttttattttttttaatttttaaggctatttccatctggaaattatatattttgactagaacaatgggagctggcacccatttatgaga
                     C - G
                     T - A
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C C C G C     A
    T T G A        A      | | | | |     G
  G         A C C G       G G G C G     C
  G           | | |                 T T
  T         A G G C
    T T A          G     AGATC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A *
                    G T A
intron: position=38, length=13 (in A-loop)
TTTCAACACTGAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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