The detailed information of tRNA gene sequence


Sequence ID>FU090900043
Genome IDCR380956
Search identical group
Phylum/ClassAscomycota
SpeciesCandida glabrata CBS 138 CBS138
Chromosome chrJ
Start position on genome 154247
End posion on genome 154355
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gttactcagatgagcgcatgtttgagcattatcaacgagttattggtaaagaagtctacgttaccctcaaaatgtttcgtatagacataaatcacattat
tRNA gene sequence 
GGGAGGTTGGCCGAGTGGTTTAAGGCGTCAGATTTAGGCTCTGATATCTTCGGATGCAAG
GGTTCGAATCCCTTATCTCTCAtta
Downstream region at tRNA end position 
atttttttttgatttttaagattccctgaatacccacccattcaagggaaaatggtaacaaaactgaaaaacccgattctcggctttcctgctccggaat
Secondary structure (Cloverleaf model)
>FU090900043	Leu	TAG
                   t      Atta atttttttttgatttttaagattccctgaatacccacccattcaagggaaaatggtaacaaaactgaaaaacccgattctcggctttcctgctccggaat
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     G + T
                     T - A          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATCTTCGGATGC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G *
                    T A G
intron: position=38, length=27 (in A-loop)
TGAGTTGAAACACTTAAAGCTTAAATT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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