The detailed information of tRNA gene sequence


Sequence ID>FU090900057
Genome IDAE017345
Search identical group
Phylum/ClassBasidiomycota
SpeciesCryptococcus neoformans var. neoformans JEC21
Chromosome chr5
Start position on genome 38007
End posion on genome 38114
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gctgtgctacgtaggagatgaacgcggattacgacaataatgtacagttgattttggtgtggaaaattgatgatttgcatggtgatcgaaaacatagcaa
tRNA gene sequence 
GCCCCCGTGGCGCAATCGGTAGCGCGCACGACTCTTAATCGTGCGGTTGCGGGTTCGAGC
CCCGCCGGAGGCTttt
Downstream region at tRNA end position 
ttacactttttcttttttcttttgcaatctcgttctttttattctatctattatgtttcatctaataaaaatgaacaacactgtgccgcaatagtagtgt
Secondary structure (Cloverleaf model)
>FU090900057	Lys	CTT
                   a      Tttt ttacactttttcttttttcttttgcaatctcgttctttttattctatctattatgtttcatctaataaaaatgaacaacactgtgccgcaatagtagtgt
                     G - C
                     C - G
                     C - G
                     C   A
                     C - G
                     C - G
                     G - C          C G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    C       C G C G       G C G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     CGGTT
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A *
                    C T T
intron: position=38, length=35 (in A-loop)
GAGTCTGCTTGAACTGGTTACGGGCCATCATCTCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK