Sequence ID | >FU090900061 |
Genome ID | AE017345 |
Phylum/Class | Basidiomycota |
Species | Cryptococcus neoformans var. neoformans JEC21 |
Chromosome
|
chr5
|
Start position on genome
|
514325
|
End posion on genome
|
514236
|
Amino Acid
|
Phe
|
Anticodon
|
GAA
|
Upstream region at tRNA start position
|
tttgtgttgtggttatggttgttgtttttttaagttccactaccttttgttaagtatgattttatttaactatatgcgatgtaaatcactttttctattc
|
tRNA gene sequence
|
GGCGACATAGCTCAGTTGGGAGAGCGCACGACTGAAGATCGTGCGGTCCCTGGTTCGATC CCGGGTGGCGCCAtta
|
Downstream region at tRNA end position
|
tttttagccttttttttacataacaaaacttgtaataaataaatataaaggtcttcttcgtacttctcataaaataatcaccctcatgaatgactactgt
|
Secondary structure (Cloverleaf model) | >FU090900061 Phe GAA
c Atta tttttagccttttttttacataacaaaacttgtaataaataaatataaaggtcttcttcgtacttctcataaaataatcaccctcatgaatgactactgt
G - C
G - C
C - G
G - C
A G
C - G
A - T C T
T G G G C C A
T G A A | | + | | G
T C T C G C C T G G C
G | | | | T T
G G A G C
G A G CGGTC
C - G
A - T
C - G
G - C
A - T
C A
T G *
G A A
intron: position=38, length=17 (in A-loop)
TTCAAATAAAGAATCAA
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |