Sequence ID | >FU090900089 |
Genome ID | AE017356 |
Phylum/Class | Basidiomycota |
Species | Cryptococcus neoformans var. neoformans JEC21 |
Chromosome
|
chr14
|
Start position on genome
|
376661
|
End posion on genome
|
376554
|
Amino Acid
|
Lys
|
Anticodon
|
CTT
|
Upstream region at tRNA start position
|
tacctgctcctgagattgcgtctcagatgtacgacattatagaaggtaagtttggattcctctgataacaatgtcccagaatagaaaaaagacaccgaaa
|
tRNA gene sequence
|
GCCCCCGTGGCGCAATCGGTAGCGCGCACGACTCTTAATCGTGCGGTTGCGGGTTCGAGC CCCGCCGGAGGCTtct
|
Downstream region at tRNA end position
|
ctttttatttcttcgctatacctacgtctgcacaatctcatgctctttgttggatcatttatccaaaaacttagcgaagaaagcgcatggaaacggtcga
|
Secondary structure (Cloverleaf model) | >FU090900089 Lys CTT
a Ttct ctttttatttcttcgctatacctacgtctgcacaatctcatgctctttgttggatcatttatccaaaaacttagcgaagaaagcgcatggaaacggtcga
G - C
C - G
C - G
C A
C - G
C - G
G - C C G
T C G C C C A
T A A G | | | | | G
C C G C G G C G G G C
G | | | | T T
G G C G C
T A G CGGTT
C - G
A - T
C - G
G - C
A - T
C A
T A *
C T T
intron: position=38, length=35 (in A-loop)
GAGTCTGCTTGAACCGGTTACGGGCCATCATCTCA
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |