The detailed information of tRNA gene sequence


Sequence ID>FU090900099
Genome IDCR382135
Search identical group
Phylum/ClassAscomycota
SpeciesDebaryomyces hansenii CBS767
Chromosome chrC
Start position on genome 195446
End posion on genome 195530
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ataactcgtcaatcggtcgtattacgatcaaataacggtttatgtcctctatatactaaaacacggatatacaaatttgtggtgaaatcttcctagattc
tRNA gene sequence 
GCCCTTGTGGCCTAATTGGTTAAGGTGTTATCCTCCGGAGATAATGATTGCGGGTTCGAG
TCCCGCCTCGGGCTtat
Downstream region at tRNA end position 
cgcaacttttatttattctatttttgataatttgagagaacggactcaactgaattgcaaggaaattttttttgttactagttataagaaataagagaag
Secondary structure (Cloverleaf model)
>FU090900099	Arg	CCG
                   c      Ttat cgcaacttttatttattctatttttgataatttgagagaacggactcaactgaattgcaaggaaattttttttgttactagttataagaaataagagaag
                     G - C
                     C - G
                     C - G
                     C - G
                     T   C
                     T   T
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    T       T C C G       G C G G G     C
    G       | | | +                 T T
    G       A G G T
      T T A        G     TGATT
                    T - A
                    T - A
                    A - T
                    T - A
                    C - G
                  C       A
                  T       G *
                    C C G
intron: position=38, length=11 (in A-loop)
TTAACGAGTTA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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