The detailed information of tRNA gene sequence


Sequence ID>FU090900100
Genome IDCR382135
Search identical group
Phylum/ClassAscomycota
SpeciesDebaryomyces hansenii CBS767
Chromosome chrC
Start position on genome 326679
End posion on genome 326764
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tagttgaatgtggatttaagctttaaatgggcttgaaagtagtaatttagtgaatgaaaaatttatattgaactcacaataatacctttcaagattatta
tRNA gene sequence 
GCCTGGCTAGCTCAATCGGTAGAGCGTTTGACTCTTAATCAAAAGGTTGCGGGTTCGATC
CCCGCGTCGGGTTctt
Downstream region at tRNA end position 
taattttttttctaatttttaatgtcagaagtatacgagtcagttgaagcaggtttaccgtaagagattgtaaatccaaatttcaagattaactacaaca
Secondary structure (Cloverleaf model)
>FU090900100	Lys	CTT
                   a      Tctt taattttttttctaatttttaatgtcagaagtatacgagtcagttgaagcaggtttaccgtaagagattgtaaatccaaatttcaagattaactacaaca
                     G + T
                     C - G
                     C - G
                     T + G
                     G - C
                     G + T
                     C - G          C T
                    T     C G C C C     A
      T A A        A      | | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A *
                    C T T
intron: position=38, length=13 (in A-loop)
TACAAGAGTAGCT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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