The detailed information of tRNA gene sequence


Sequence ID>FU090900139
Genome IDCR382124
Search identical group
Phylum/ClassAscomycota
SpeciesKluyveromyces lactis NRRL Y-1140
Chromosome chrD
Start position on genome 366089
End posion on genome 366219
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gtgtcaaaattatatatgaaaagaacttagaaaatattgagatcatgtgacttacattttgtagtggtagtagaacaaatcatttcactcaacaaattac
tRNA gene sequence 
GAGAGTTTGGCCGAGTGGTTAAGGCGTCAGATTTAGGCTCTGATATCTACGGATGCGCGG
GTTCGAATCCCGTAGCTCTCAtta
Downstream region at tRNA end position 
tttttttttctgtttccgctttttttttctccaacttattttcatatctagtttagagcccgcctcgaaacagttttttcggtgtacagttcgaatgctc
Secondary structure (Cloverleaf model)
>FU090900139	Leu	TAG
                   c      Atta tttttttttctgtttccgctttttttttctccaacttattttcatatctagtttagagcccgcctcgaaacagttttttcggtgtacagttcgaatgctc
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TATCTACGGATGC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G *
                    T A G
intron: position=38, length=50 (in A-loop)
TCTTTCCTCTTGCCTGGTGACTTCCATTACCAGGTAATAGAGGACAAGCA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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