The detailed information of tRNA gene sequence


Sequence ID>FU090900188
Genome IDCU329671
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr2
Start position on genome 1598845
End posion on genome 1598745
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttgattatatccgttcatttaaattactcttaaaacttctttaacaattcttttttattttatgatcaaatatttaattaagtaaactaactcaacaaca
tRNA gene sequence 
GGCCAGTTGGCCGAGCGGTCTATGGCGCAGCACTCAAGTTGCTGTATCGAAAGATGCGAG
GGTTCGAATCCCTCACTGGTCAcca
Downstream region at tRNA end position 
tttttgttaatttatgactgtacaaatttacaatgaacttttctaaagttttcaaacataatccttcgctatcattttagggtaagacagcgggttttta
Secondary structure (Cloverleaf model)
>FU090900188	Leu	CAA
                   a      Acca tttttgttaatttatgactgtacaaatttacaatgaacttttctaaagttttcaaacataatccttcgctatcattttagggtaagacagcgggttttta
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G       + | | |                 T T
    T       T G G C
      C T A        G     TATCGAAAGATGC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       T
                  T       G *
                    C A A
intron: position=38, length=19 (in A-loop)
TAATACTTGGACGATAGTC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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