The detailed information of tRNA gene sequence


Sequence ID>FU090900189
Genome IDCU329671
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr2
Start position on genome 1598155
End posion on genome 1598075
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcaagccaccgcgatagcagagaataacaattttattgaatactgcattatcagtaaatacaaatataatgtctattagtttcatttgtttaaagcat
tRNA gene sequence 
GCTTCTGTAGCTCAGTCGGTGGTAGCATCCCTCTCATAAGGGGAAGGTCGTGAGTTCGAG
CCTCACCAGGAGCAtta
Downstream region at tRNA end position 
taggtcgggtagcatagttggttattgcgcacgactgttaatcgtgaggtcgagggttcgagtccctccctgaccgttttctttttatattatttacaaa
Secondary structure (Cloverleaf model)
>FU090900189	Met	CAT
                   t      Atta taggtcgggtagcatagttggttattgcgcacgactgttaatcgtgaggtcgagggttcgagtccctccctgaccgttttctttttatattatttacaaa
                     G - C
                     C - G
                     T - A
                     T + G
                     C - G
                     T - A
                     G - C          C G
                    T     C A C T C     A
      T G A        A      | | | | |     G
    C       C T C G       G T G A G     C
    G         | | |                 T T
    G       T A G C
      T G G        A     AGGTC
                    T - A
                    C - G
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A *
                    C A T
intron: position=38, length=7 (in A-loop)
TGATGAT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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