The detailed information of tRNA gene sequence


Sequence ID>FU090900191
Genome IDCU329671
Search identical group
Phylum/ClassAscomycota
SpeciesSchizosaccharomyces_pombe_972h-
Chromosome chr2
Start position on genome 1160994
End posion on genome 1160893
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tctttaagctcgtattatgccgcaaaatctatatttcaaaatttaatcctcataataagctacgcataaattatactaaattttaaccaggcaaaggttg
tRNA gene sequence 
TTACGCGTGGCGCAATGGTAGCGCATCTCATTCCTAACGAGAAGGTTGCGGGTTCGAGTC
CCGTCGTGTAAGatt
Downstream region at tRNA end position 
gtttttatgaaggaagcttcattataacctccttaaaaaatttaaatttcaatatcatactacacacaatgatattgtggtattttgttttgctcatgaa
Secondary structure (Cloverleaf model)
>FU090900191	Arg	CCT
                   g      Gatt gtttttatgaaggaagcttcattataacctccttaaaaaatttaaatttcaatatcatactacacacaatgatattgtggtattttgttttgctcatgaa
                     T - A
                     T - A
                     A - T
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     T G C C C     A
        A A        G      + | | | |     G
      T     C G C G       G C G G G     C
      G     | | | |                 T T
      G     G C G C
        T A        A     AGGTT
                    T - A
                    C - G
                    T - A
                    C - G
                    A   C
                  T       A
                  T       A *
                    C C T
intron: position=38, length=30 (in A-loop)
TACGACCTGATCGTTGTTGGGGAGTGAATT
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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