The detailed information of tRNA gene sequence


Sequence ID>FU090900199
Genome IDCR382127
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrA
Start position on genome 166763
End posion on genome 166861
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
gctcagaacatggcatccaggttcgagtcaattgcatactaagagatgtacttgtaggactggtcatatatactaggaaccgccctgaccgaaaaacaca
tRNA gene sequence 
GGCAACCTGGCCGAGCGGTCTAAGGCGCCAGGTTAAGGTCCTGGTCTCTTCGGAGGCGAG
AGTTCGAATCTCTCGGTTGTCAttg
Downstream region at tRNA end position 
ctactgaggtagttctttttgcttctggcagacgacactgttatcgtctccaggtgagctacagtgcgtttttagatgtagtggcatgtctgtacagtat
Secondary structure (Cloverleaf model)
>FU090900199	Leu	AAG
                   a      Attg ctactgaggtagttctttttgcttctggcagacgacactgttatcgtctccaggtgagctacagtgcgtttttagatgtagtggcatgtctgtacagtat
                     G - C
                     G + T
                     C - G
                     A - T
                     A - T
                     C - G
                     C - G          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TCTCTTCGGAGGC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G *
                    A A G
intron: position=38, length=17 (in A-loop)
CAATACCTTGACAAATA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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