The detailed information of tRNA gene sequence


Sequence ID>FU090900222
Genome IDCR382128
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrB
Start position on genome 1455005
End posion on genome 1454925
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aattcccaagatgatagatttttgcattattttttgcatcacgtgactttggtcactattggacaaattgaaagtttagttttttgagtaagcgtgagca
tRNA gene sequence 
GGGCTGTTGGTGTAGTGGTAACATATCTGCCTTCCAAGCAGGTGCCAGGGGTTCAATTCC
CCTACAGCTCAaaa
Downstream region at tRNA end position 
tttttcggtttctgtattagcctgacattcaaatgacgaatactccctcgttacagcagtaatacttttttttttttttattaaatgtctatctacttgt
Secondary structure (Cloverleaf model)
>FU090900222	Gly	TCC
                   a      Aaaa tttttcggtttctgtattagcctgacattcaaatgacgaatactccctcgttacagcagtaatacttttttttttttttattaaatgtctatctacttgt
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C
                     T - A          T T
                    T     T C C C C     A
        G A        G      | | | | |     A
      T     T G T G       A G G G G     C
      G     | | | +                 T T
      G     A C A T
        T A        A     TGCC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C C
intron: position=38, length=10 (in A-loop)
TTCAGTTGTA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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