The detailed information of tRNA gene sequence


Sequence ID>FU090900225
Genome IDCR382128
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrB
Start position on genome 956800
End posion on genome 956713
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
tgtttttttattcttttttatgatttttttattctaaatatgatttaattttctcccttccttctcaaaaactcccctatcgaaccttgccccaactttc
tRNA gene sequence 
GGTTGTATAGTGTAGTGGTTATCACCTTGGATTCTGATTCCAGTAACCCCGGTTCGAGTC
CGGGTACGACCTatc
Downstream region at tRNA end position 
tttttgtcggcttcttttttggcccgttcgagagctccaggcgtcttgtatgtcaatcatacatacttgttataggttatgagctaagactatagagtgc
Secondary structure (Cloverleaf model)
>FU090900225	Gln	CTG
                   c      Tatc tttttgtcggcttcttttttggcccgttcgagagctccaggcgtcttgtatgtcaatcatacatacttgttataggttatgagctaagactatagagtgc
                     G - C
                     G - C
                     T - A
                     T + G
                     G - C
                     T - A
                     A - T          T G
                    T     G G G C C     A
      T G A        A      | | | | |     G
    G       T G T G       C C C G G     C
    G         | | |                 T T
    T       T C A C
      T A          C     TAAC
                    T + G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A *
                    C T G
intron: position=38, length=16 (in A-loop)
CGAAAGCTCAGCTAAC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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