The detailed information of tRNA gene sequence


Sequence ID>FU090900234
Genome IDCR382129
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrC
Start position on genome 1642683
End posion on genome 1642771
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gtctttttcgagcaagaaatgtttgccaaattattttattatagtcacgtgactctgaattattatagtagtttcaacttttttcaaaattcaaaaaaac
tRNA gene sequence 
CTCCCGGTGGCCAAGCTGGTTTAAGGCGCGAGACTGTAAATCTTGAGATCGGGCGTTCGA
CTCGCCCCCGGGAGAttt
Downstream region at tRNA end position 
ttttcctacgagatccgctttggcagtactgtagttacttattttttttaaaaaaaaaattatgactaagctgcagataactattgcaagtatggggatg
Secondary structure (Cloverleaf model)
>FU090900234	Tyr	GTA
                   c      Attt ttttcctacgagatccgctttggcagtactgtagttacttattttttttaaaaaaaaaattatgactaagctgcagataactattgcaagtatggggatg
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T C
                    T     C C C G C     A
    T C G A        G      | | | | |     G
  G         A C C G       G G G C G     C
  G           | | |                 T T
  T         A G G C
    T T A          G     AGATC
                    C - G
                    G + T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A *
                    G T A
intron: position=38, length=14 (in A-loop)
TGGTATAAATTGTA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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