The detailed information of tRNA gene sequence


Sequence ID>FU090900238
Genome IDCR382129
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrC
Start position on genome 1976222
End posion on genome 1976317
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gtatcatttgggcaatttttttcggtttttttttcttttcttcggcctcttctgtttttacgccttctgtaagtccaaccgacctcggactccacattgg
tRNA gene sequence 
GGCAACCTGGCCGAGTGGTCTAAGGCGCCAGGTTCAGGTCCTGGTCTCTTCGGAGGCGAG
AGTTCGAATCTCTCGGTTGTCAgca
Downstream region at tRNA end position 
gcagagcgtgagctcttcttttttttcttcttcctctctctttctcattggaaattttttttttttggtgagactcaacgcaggtaggtgtgtttaccca
Secondary structure (Cloverleaf model)
>FU090900238	Leu	CAG
                   g      Agca gcagagcgtgagctcttcttttttttcttcttcctctctctttctcattggaaattttttttttttggtgagactcaacgcaggtaggtgtgtttaccca
                     G - C
                     G + T
                     C - G
                     A - T
                     A - T
                     C - G
                     C - G          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TCTCTTCGGAGGC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G *
                    C A G
intron: position=38, length=14 (in A-loop)
AGACTGAATCAATA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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