The detailed information of tRNA gene sequence


Sequence ID>FU090900315
Genome IDCR382131
Search identical group
Phylum/ClassAscomycota
SpeciesYarrowia lipolytica CLIB122
Chromosome chrE
Start position on genome 1560846
End posion on genome 1560724
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
gccccaaaaacggcgaaaacgcaagatcagaatttctggcctagatggtgcaagcgcgaattaaggtttgggtttgtattttcgaggtcgtgagttcgat
tRNA gene sequence 
GCTCCAGTGGCGCAGCTGGTTAGCGCTTCGTGCTTATAACGCGACGGTCGTGGGTTCAAT
CCCCTCCTGGAGCAttc
Downstream region at tRNA end position 
tttttgtaggggcgtggcgtgtaattgttttcccctagctgtatatctctttgtttttcactttttacagccgtaaatcacgacggtggtaaacacaaac
Secondary structure (Cloverleaf model)
>FU090900315	Ile	TAT
                   t      Attc tttttgtaggggcgtggcgtgtaattgttttcccctagctgtatatctctttgtttttcactttttacagccgtaaatcacgacggtggtaaacacaaac
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C          C T
                    T     C T C C C     A
      C G A        G      |   | | |     A
    T       C G C G       G T G G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        T     CGGTC
                    T - A
                    C - G
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A *
                    T A T
intron: position=38, length=49 (in A-loop)
GATTTTAGACTTGATCATTCTCTATGTCAAAGTCACGGTCGTGTGAGGA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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